STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ANKRD54ANK_REP_REGION domain-containing protein. (285 aa)    
Predicted Functional Partners:
TULP3
Tubby-like protein; Belongs to the TUB family.
    
   0.859
IFT81
IFT81_CH domain-containing protein.
    
 0.784
WDR90
Uncharacterized protein.
    
 0.749
IFT22
Uncharacterized protein.
    
 0.696
MARS1
Uncharacterized protein; Belongs to the class-I aminoacyl-tRNA synthetase family.
   
 0.688
UBXN7
UBX domain-containing protein 7.
    
 0.686
TUB
Tubby-like protein; Belongs to the TUB family.
    
   0.660
ENSVURP00010024854
Tub domain-containing protein; Belongs to the TUB family.
    
   0.660
TTC30B
Uncharacterized protein.
    
 0.654
IFT88
Uncharacterized protein.
   
 0.653
Your Current Organism:
Vombatus ursinus
NCBI taxonomy Id: 29139
Other names: V. ursinus, coarse-haired wombat, common wombat
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.