STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSVURP00010005124F-box domain-containing protein. (389 aa)    
Predicted Functional Partners:
SKP1
Uncharacterized protein; Belongs to the SKP1 family.
   
 0.999
ENSVURP00010027337
Skp1_POZ domain-containing protein.
   
 0.999
NEDD8
Ubiquitin-like domain-containing protein.
    
 0.994
CUL3
CULLIN_2 domain-containing protein; Belongs to the cullin family.
    
 0.976
CUL1
CULLIN_2 domain-containing protein; Belongs to the cullin family.
    
 0.976
CACUL1
CDK2 associated cullin domain 1; Belongs to the cullin family.
    
 0.976
FAU
40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family.
    
 0.957
ENSVURP00010007418
Ubiquitin-like domain-containing protein.
    
 0.957
ENSVURP00010010815
40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family.
    
 0.957
ENSVURP00010024747
40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family.
    
 0.957
Your Current Organism:
Vombatus ursinus
NCBI taxonomy Id: 29139
Other names: V. ursinus, coarse-haired wombat, common wombat
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.