STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSVURP00010006668Uncharacterized protein. (80 aa)    
Predicted Functional Partners:
BAG6
Ubiquitin-like domain-containing protein.
    
 
 0.960
RSPO2
Uncharacterized protein.
    
 0.950
RSPO1
Uncharacterized protein.
    
 0.926
LOC114052416
Uncharacterized protein.
   
 
 0.872
ENSVURP00010025394
annotation not available
   
 
 0.872
LOC114038877
Ubiquitin-like domain-containing protein.
    
 0.867
ENSVURP00010013848
Ubiquitin-like domain-containing protein.
    
 0.867
UBA52
Ubiquitin-like domain-containing protein.
    
 0.867
UBE2K
Uncharacterized protein; Belongs to the ubiquitin-conjugating enzyme family.
    
 0.833
ENSVURP00010001782
UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family.
   
 0.822
Your Current Organism:
Vombatus ursinus
NCBI taxonomy Id: 29139
Other names: V. ursinus, coarse-haired wombat, common wombat
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.