STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PAXXUncharacterized protein. (216 aa)    
Predicted Functional Partners:
XRCC5
X-ray repair cross-complementing protein 5; Single-stranded DNA-dependent ATP-dependent helicase. Belongs to the ku80 family.
    
 
 0.687
XRCC6
VWFA domain-containing protein.
    
 
 0.670
NHEJ1
Uncharacterized protein.
    
 
 0.650
WRN
Uncharacterized protein.
    
 
 0.644
LOC114031680
Uncharacterized protein; Belongs to the PI3/PI4-kinase family.
    
 
 0.575
ENSVURP00010006218
annotation not available
    
 
 0.575
SHLD2
FAM35_C domain-containing protein.
      
 0.555
XRCC4
Uncharacterized protein.
      
 0.553
ENSVURP00010018356
Uncharacterized protein.
      
 0.550
APTX
HIT domain-containing protein.
      
 0.547
Your Current Organism:
Vombatus ursinus
NCBI taxonomy Id: 29139
Other names: V. ursinus, coarse-haired wombat, common wombat
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.