STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ARID1AARID domain-containing protein. (1921 aa)    
Predicted Functional Partners:
SMARCE1
HMG box domain-containing protein.
    
 0.994
SMARCB1
SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1.
    
 0.990
SMARCD1
SWIB domain-containing protein.
    
 0.989
ACTL6A
Uncharacterized protein; Belongs to the actin family.
    
 0.987
SMARCD2
SWIB domain-containing protein.
    
 0.986
SMARCA4
Uncharacterized protein.
   
 0.985
SMARCA2
Uncharacterized protein.
   
 0.984
SMARCD3
SWIB domain-containing protein.
    
 0.980
SMARCC2
Uncharacterized protein.
   
 0.980
ENSVURP00010000021
SWIB domain-containing protein.
    
 0.978
Your Current Organism:
Vombatus ursinus
NCBI taxonomy Id: 29139
Other names: V. ursinus, coarse-haired wombat, common wombat
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.