STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC114049920FHA domain-containing protein. (1589 aa)    
Predicted Functional Partners:
TEP1
Telomerase associated protein 1.
    
 0.788
CCDC68
Uncharacterized protein.
    
 
 0.698
TAF12
TFIID_20kDa domain-containing protein.
    
 0.679
SUPT3H
SPT3 homolog, SAGA and STAGA complex component.
    
 0.673
PLA2G4A
Phospholipase A2.
     
 0.664
ELP2
Uncharacterized protein.
    
 0.660
C1QC
C1q domain-containing protein.
    
  0.659
WDR62
WD repeat domain 62.
    
 
 0.627
CEP128
Centrosomal protein 128.
    
 0.608
CCDC120
Coiled-coil domain containing 120.
    
 0.591
Your Current Organism:
Vombatus ursinus
NCBI taxonomy Id: 29139
Other names: V. ursinus, coarse-haired wombat, common wombat
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.