Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
AMELX | NR2E1 | ENSVURP00010029247 | ENSVURP00010013475 | Amelogenin X-linked. | Uncharacterized protein. | 0.827 |
ATN1 | ENSVURP00010031646 | ENSVURP00010002417 | ENSVURP00010031646 | Atrophin 1. | Uncharacterized protein. | 0.707 |
ATN1 | NR2E1 | ENSVURP00010002417 | ENSVURP00010013475 | Atrophin 1. | Uncharacterized protein. | 0.909 |
ENSVURP00010023314 | NR2E1 | ENSVURP00010023314 | ENSVURP00010013475 | Uncharacterized protein. | Uncharacterized protein. | 0.603 |
ENSVURP00010024879 | HSP90B1 | ENSVURP00010024879 | ENSVURP00010007221 | TPR_REGION domain-containing protein. | HATPase_c domain-containing protein. | 0.645 |
ENSVURP00010024879 | NR2E1 | ENSVURP00010024879 | ENSVURP00010013475 | TPR_REGION domain-containing protein. | Uncharacterized protein. | 0.595 |
ENSVURP00010031646 | ATN1 | ENSVURP00010031646 | ENSVURP00010002417 | Uncharacterized protein. | Atrophin 1. | 0.707 |
ENSVURP00010031646 | NCOR2 | ENSVURP00010031646 | ENSVURP00010000388 | Uncharacterized protein. | Nuclear receptor corepressor 2. | 0.509 |
ENSVURP00010031646 | NR2E1 | ENSVURP00010031646 | ENSVURP00010013475 | Uncharacterized protein. | Uncharacterized protein. | 0.877 |
HDAC6 | HSP90B1 | ENSVURP00010013577 | ENSVURP00010007221 | UBP-type domain-containing protein. | HATPase_c domain-containing protein. | 0.650 |
HDAC6 | MED1 | ENSVURP00010013577 | ENSVURP00010007911 | UBP-type domain-containing protein. | Mediator of RNA polymerase II transcription subunit 1; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. | 0.401 |
HDAC6 | NCOR1 | ENSVURP00010013577 | ENSVURP00010008523 | UBP-type domain-containing protein. | Nuclear receptor corepressor 1. | 0.925 |
HDAC6 | NCOR2 | ENSVURP00010013577 | ENSVURP00010000388 | UBP-type domain-containing protein. | Nuclear receptor corepressor 2. | 0.929 |
HDAC6 | NR2E1 | ENSVURP00010013577 | ENSVURP00010013475 | UBP-type domain-containing protein. | Uncharacterized protein. | 0.700 |
HSP90B1 | ENSVURP00010024879 | ENSVURP00010007221 | ENSVURP00010024879 | HATPase_c domain-containing protein. | TPR_REGION domain-containing protein. | 0.645 |
HSP90B1 | HDAC6 | ENSVURP00010007221 | ENSVURP00010013577 | HATPase_c domain-containing protein. | UBP-type domain-containing protein. | 0.650 |
HSP90B1 | NR2E1 | ENSVURP00010007221 | ENSVURP00010013475 | HATPase_c domain-containing protein. | Uncharacterized protein. | 0.626 |
MED1 | HDAC6 | ENSVURP00010007911 | ENSVURP00010013577 | Mediator of RNA polymerase II transcription subunit 1; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. | UBP-type domain-containing protein. | 0.401 |
MED1 | NCOR1 | ENSVURP00010007911 | ENSVURP00010008523 | Mediator of RNA polymerase II transcription subunit 1; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. | Nuclear receptor corepressor 1. | 0.773 |
MED1 | NCOR2 | ENSVURP00010007911 | ENSVURP00010000388 | Mediator of RNA polymerase II transcription subunit 1; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. | Nuclear receptor corepressor 2. | 0.808 |
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