STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSVURP00010013765PDZ domain-containing protein. (101 aa)    
Predicted Functional Partners:
IFT57
Uncharacterized protein.
    
 0.895
CASK
Uncharacterized protein; Belongs to the MAGUK family.
    
 0.874
IFT80
WD_REPEATS_REGION domain-containing protein.
    
 0.873
IFT172
Uncharacterized protein.
    
 0.871
EIF1AX
S1-like domain-containing protein; Seems to be required for maximal rate of protein biosynthesis. Enhances ribosome dissociation into subunits and stabilizes the binding of the initiator Met-tRNA(I) to 40 S ribosomal subunits.
   
  
 0.861
IFT88
Uncharacterized protein.
    
 0.853
MAGI3
Membrane associated guanylate kinase, WW and PDZ domain containing 3.
    
 0.835
SLC5A6
Solute carrier family 5 member 6; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family.
    
 0.822
CLUAP1
Uncharacterized protein.
    
 0.817
ATP7A
Uncharacterized protein.
    
 0.796
Your Current Organism:
Vombatus ursinus
NCBI taxonomy Id: 29139
Other names: V. ursinus, coarse-haired wombat, common wombat
Server load: low (8%) [HD]