STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NAGPAEGF-like domain-containing protein. (593 aa)    
Predicted Functional Partners:
XYLT1
Uncharacterized protein.
 
   
  0.710
XYLT2
Uncharacterized protein.
 
   
  0.710
C7
Uncharacterized protein.
   
  0.707
ENSVURP00010016618
UPAR/Ly6 domain-containing protein.
    
 0.672
TNFRSF17
BCMA-Tall_bind domain-containing protein.
    
 0.652
IL1B
Multifunctional fusion protein; Potent proinflammatory cytokine. Initially discovered as the major endogenous pyrogen, induces prostaglandin synthesis, neutrophil influx and activation, T-cell activation and cytokine production, B- cell activation and antibody production, and fibroblast proliferation and collagen production; Belongs to the IL-1 family.
    
 0.641
ENSVURP00010023487
TACI-CRD2 domain-containing protein.
    
 0.635
SPARC
Secreted protein acidic and cysteine rich.
     
 0.607
GNPTAB
Uncharacterized protein.
     
 0.590
DAB2
PID domain-containing protein.
   
 0.589
Your Current Organism:
Vombatus ursinus
NCBI taxonomy Id: 29139
Other names: V. ursinus, coarse-haired wombat, common wombat
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