STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSVURP00010019250Nudix hydrolase domain-containing protein; Belongs to the Nudix hydrolase family. (246 aa)    
Predicted Functional Partners:
NUDT18
Nudix hydrolase domain-containing protein; Belongs to the Nudix hydrolase family.
      
0.547
NUDT5
Nudix hydrolase domain-containing protein; Belongs to the Nudix hydrolase family.
      
 0.547
NUDT22
Nudix hydrolase domain-containing protein.
      
 0.538
NUDT15
Nudix hydrolase domain-containing protein.
      
 0.516
NUDT3
Nudix hydrolase domain-containing protein.
      
 0.497
SLC35F6
Solute carrier family 35 member F6; May play a role as a nucleotide-sugar transporter.
      
 0.480
NUDT12
Uncharacterized protein.
      
 0.459
TFIP11
Tuftelin-interacting protein 11; Involved in pre-mRNA splicing, specifically in spliceosome disassembly during late-stage splicing events. Intron turnover seems to proceed through reactions in two lariat-intron associated complexes termed Intron Large (IL) and Intron Small (IS). In cooperation with DHX15 seems to mediate the transition of the U2, U5 and U6 snRNP- containing IL complex to the snRNP-free IS complex leading to efficient debranching and turnover of excised introns. May play a role in the differentiation of ameloblasts and odontoblasts or in the forming of the enamel extrac [...]
      
 0.433
UBE4A
Ubiquitination factor E4A.
      
 0.431
SPRED3
Sprouty related EVH1 domain containing 3.
      
 0.431
Your Current Organism:
Vombatus ursinus
NCBI taxonomy Id: 29139
Other names: V. ursinus, coarse-haired wombat, common wombat
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.