Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
BOP1 | DDX50 | ENSVURP00010032486 | ENSVURP00010019870 | Ribosome biogenesis protein BOP1; Component of the PeBoW complex, which is required for maturation of 28S and 5.8S ribosomal RNAs and formation of the 60S ribosome. | Uncharacterized protein. | 0.969 |
BOP1 | DKC1 | ENSVURP00010032486 | ENSVURP00010024938 | Ribosome biogenesis protein BOP1; Component of the PeBoW complex, which is required for maturation of 28S and 5.8S ribosomal RNAs and formation of the 60S ribosome. | PUA domain-containing protein. | 0.983 |
BOP1 | EBNA1BP2 | ENSVURP00010032486 | ENSVURP00010000549 | Ribosome biogenesis protein BOP1; Component of the PeBoW complex, which is required for maturation of 28S and 5.8S ribosomal RNAs and formation of the 60S ribosome. | Uncharacterized protein. | 0.998 |
BOP1 | GNL3 | ENSVURP00010032486 | ENSVURP00010019976 | Ribosome biogenesis protein BOP1; Component of the PeBoW complex, which is required for maturation of 28S and 5.8S ribosomal RNAs and formation of the 60S ribosome. | CP-type G domain-containing protein. | 0.997 |
BOP1 | GNL3L | ENSVURP00010032486 | ENSVURP00010006572 | Ribosome biogenesis protein BOP1; Component of the PeBoW complex, which is required for maturation of 28S and 5.8S ribosomal RNAs and formation of the 60S ribosome. | CP-type G domain-containing protein. | 0.997 |
BOP1 | GTPBP4 | ENSVURP00010032486 | ENSVURP00010013363 | Ribosome biogenesis protein BOP1; Component of the PeBoW complex, which is required for maturation of 28S and 5.8S ribosomal RNAs and formation of the 60S ribosome. | Nucleolar GTP-binding protein 1; Involved in the biogenesis of the 60S ribosomal subunit. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. OBG GTPase family. NOG subfamily. | 0.996 |
BOP1 | PES1 | ENSVURP00010032486 | ENSVURP00010014390 | Ribosome biogenesis protein BOP1; Component of the PeBoW complex, which is required for maturation of 28S and 5.8S ribosomal RNAs and formation of the 60S ribosome. | Pescadillo homolog; Component of the PeBoW complex, which is required for maturation of 28S and 5.8S ribosomal RNAs and formation of the 60S ribosome; Belongs to the pescadillo family. | 0.999 |
BOP1 | WDR12 | ENSVURP00010032486 | ENSVURP00010007461 | Ribosome biogenesis protein BOP1; Component of the PeBoW complex, which is required for maturation of 28S and 5.8S ribosomal RNAs and formation of the 60S ribosome. | Ribosome biogenesis protein WDR12; Component of the PeBoW complex, which is required for maturation of 28S and 5.8S ribosomal RNAs and formation of the 60S ribosome. | 0.999 |
DDX50 | BOP1 | ENSVURP00010019870 | ENSVURP00010032486 | Uncharacterized protein. | Ribosome biogenesis protein BOP1; Component of the PeBoW complex, which is required for maturation of 28S and 5.8S ribosomal RNAs and formation of the 60S ribosome. | 0.969 |
DDX50 | DKC1 | ENSVURP00010019870 | ENSVURP00010024938 | Uncharacterized protein. | PUA domain-containing protein. | 0.970 |
DDX50 | DROSHA | ENSVURP00010019870 | ENSVURP00010027283 | Uncharacterized protein. | Uncharacterized protein. | 0.964 |
DDX50 | EBNA1BP2 | ENSVURP00010019870 | ENSVURP00010000549 | Uncharacterized protein. | Uncharacterized protein. | 0.970 |
DDX50 | GNL3 | ENSVURP00010019870 | ENSVURP00010019976 | Uncharacterized protein. | CP-type G domain-containing protein. | 0.966 |
DDX50 | GNL3L | ENSVURP00010019870 | ENSVURP00010006572 | Uncharacterized protein. | CP-type G domain-containing protein. | 0.956 |
DDX50 | GTPBP4 | ENSVURP00010019870 | ENSVURP00010013363 | Uncharacterized protein. | Nucleolar GTP-binding protein 1; Involved in the biogenesis of the 60S ribosomal subunit. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. OBG GTPase family. NOG subfamily. | 0.960 |
DDX50 | PES1 | ENSVURP00010019870 | ENSVURP00010014390 | Uncharacterized protein. | Pescadillo homolog; Component of the PeBoW complex, which is required for maturation of 28S and 5.8S ribosomal RNAs and formation of the 60S ribosome; Belongs to the pescadillo family. | 0.986 |
DDX50 | SF3B1 | ENSVURP00010019870 | ENSVURP00010022189 | Uncharacterized protein. | SF3b1 domain-containing protein. | 0.953 |
DDX50 | WDR12 | ENSVURP00010019870 | ENSVURP00010007461 | Uncharacterized protein. | Ribosome biogenesis protein WDR12; Component of the PeBoW complex, which is required for maturation of 28S and 5.8S ribosomal RNAs and formation of the 60S ribosome. | 0.979 |
DKC1 | BOP1 | ENSVURP00010024938 | ENSVURP00010032486 | PUA domain-containing protein. | Ribosome biogenesis protein BOP1; Component of the PeBoW complex, which is required for maturation of 28S and 5.8S ribosomal RNAs and formation of the 60S ribosome. | 0.983 |
DKC1 | DDX50 | ENSVURP00010024938 | ENSVURP00010019870 | PUA domain-containing protein. | Uncharacterized protein. | 0.970 |
page 1 of 5