STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEC61A1Plug_translocon domain-containing protein. (476 aa)    
Predicted Functional Partners:
SEC63
SEC63 domain-containing protein.
   
 
 0.999
RPL23
Uncharacterized protein; Belongs to the universal ribosomal protein uL14 family.
  
 
 0.997
RPS18
Uncharacterized protein; Belongs to the universal ribosomal protein uS13 family.
  
 
 0.997
SEC61G
Uncharacterized protein.
   
 0.996
RPN1
Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 1; Subunit of the oligosaccharyl transferase (OST) complex that catalyzes the initial transfer of a defined glycan (Glc(3)Man(9)GlcNAc(2) in eukaryotes) from the lipid carrier dolichol- pyrophosphate to an asparagine residue within an Asn-X-Ser/Thr consensus motif in nascent polypeptide chains, the first step in protein N-glycosylation. N-glycosylation occurs cotranslationally and the complex associates with the Sec61 complex at the channel-forming translocon complex that mediates protein translocation across the en [...]
   
 0.996
LOC114025808
Protein transport protein Sec61 subunit beta; Necessary for protein translocation in the endoplasmic reticulum.
   
 0.994
MRPL2
Mitochondrial ribosomal protein L2.
  
 
 0.994
ENSVURP00010021787
annotation not available
   
 0.994
LOC114048176
Uncharacterized protein; Belongs to the universal ribosomal protein uL5 family.
  
 
 0.994
RPL11
Uncharacterized protein; Belongs to the universal ribosomal protein uL5 family.
  
 
 0.994
Your Current Organism:
Vombatus ursinus
NCBI taxonomy Id: 29139
Other names: V. ursinus, coarse-haired wombat, common wombat
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.