STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LEKR1Leucine, glutamate and lysine rich 1. (105 aa)    
Predicted Functional Partners:
LOC114039688
Uncharacterized protein.
   
 
 0.884
CKAP5
Uncharacterized protein.
    
 
 0.701
ESPL1
Peptidase C50 domain-containing protein.
    
 0.590
DAG1
Peptidase S72 domain-containing protein.
    
 0.533
ERBB4
Receptor protein-tyrosine kinase.
    
 0.531
ERBB2
Receptor protein-tyrosine kinase.
    
 0.531
EGFR
Receptor protein-tyrosine kinase.
    
 0.531
ERBB3
Protein kinase domain-containing protein.
    
 0.531
LOC114040506
Malate dehydrogenase.
     
 0.518
ENSVURP00010029901
Malate dehydrogenase.
     
 0.518
Your Current Organism:
Vombatus ursinus
NCBI taxonomy Id: 29139
Other names: V. ursinus, coarse-haired wombat, common wombat
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.