AAR2 protein (Vombatus ursinus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

AAR2

Uncharacterized protein. (384 aa)

Predicted Functional Partners:

PRPF8

0.999

EFTUD2

0.977

ECD

0.969

SNRNP200

0.966

TSSC4

0.959

DDX23

0.949

CD2BP2

0.949

GFM1

0.930

ZNHIT2

0.924

EFL1

0.922

Your Current Organism:

Vombatus ursinus

NCBI taxonomy Id: 29139
Other names: V. ursinus, coarse-haired wombat, common wombat

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
AAR2	CD2BP2	ENSVURP00010024481	ENSVURP00010023465	Uncharacterized protein.	GYF domain-containing protein.	0.949
AAR2	DDX23	ENSVURP00010024481	ENSVURP00010008187	Uncharacterized protein.	Uncharacterized protein.	0.949
AAR2	ECD	ENSVURP00010024481	ENSVURP00010016659	Uncharacterized protein.	Uncharacterized protein.	0.969
AAR2	EFL1	ENSVURP00010024481	ENSVURP00010005905	Uncharacterized protein.	Tr-type G domain-containing protein.	0.922
AAR2	EFTUD2	ENSVURP00010024481	ENSVURP00010011326	Uncharacterized protein.	Elongation factor Tu GTP binding domain containing 2.	0.977
AAR2	GFM1	ENSVURP00010024481	ENSVURP00010021811	Uncharacterized protein.	Elongation factor G, mitochondrial; Mitochondrial GTPase that catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post-translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome. Does not mediate the disassembly of ribosomes from messenger RNA at the termination of mito [...]	0.930
AAR2	PRPF8	ENSVURP00010024481	ENSVURP00010010468	Uncharacterized protein.	MPN domain-containing protein.	0.999
AAR2	SNRNP200	ENSVURP00010024481	ENSVURP00010020187	Uncharacterized protein.	Uncharacterized protein.	0.966
AAR2	TSSC4	ENSVURP00010024481	ENSVURP00010015797	Uncharacterized protein.	Uncharacterized protein.	0.959
AAR2	ZNHIT2	ENSVURP00010024481	ENSVURP00010003077	Uncharacterized protein.	HIT-type domain-containing protein.	0.924
CD2BP2	AAR2	ENSVURP00010023465	ENSVURP00010024481	GYF domain-containing protein.	Uncharacterized protein.	0.949
CD2BP2	DDX23	ENSVURP00010023465	ENSVURP00010008187	GYF domain-containing protein.	Uncharacterized protein.	0.980
CD2BP2	ECD	ENSVURP00010023465	ENSVURP00010016659	GYF domain-containing protein.	Uncharacterized protein.	0.484
CD2BP2	EFL1	ENSVURP00010023465	ENSVURP00010005905	GYF domain-containing protein.	Tr-type G domain-containing protein.	0.857
CD2BP2	EFTUD2	ENSVURP00010023465	ENSVURP00010011326	GYF domain-containing protein.	Elongation factor Tu GTP binding domain containing 2.	0.965
CD2BP2	GFM1	ENSVURP00010023465	ENSVURP00010021811	GYF domain-containing protein.	Elongation factor G, mitochondrial; Mitochondrial GTPase that catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post-translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome. Does not mediate the disassembly of ribosomes from messenger RNA at the termination of mito [...]	0.857
CD2BP2	PRPF8	ENSVURP00010023465	ENSVURP00010010468	GYF domain-containing protein.	MPN domain-containing protein.	0.971
CD2BP2	SNRNP200	ENSVURP00010023465	ENSVURP00010020187	GYF domain-containing protein.	Uncharacterized protein.	0.999
CD2BP2	TSSC4	ENSVURP00010023465	ENSVURP00010015797	GYF domain-containing protein.	Uncharacterized protein.	0.950
CD2BP2	ZNHIT2	ENSVURP00010023465	ENSVURP00010003077	GYF domain-containing protein.	HIT-type domain-containing protein.	0.436