STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC114050403Homeobox domain-containing protein. (410 aa)    
Predicted Functional Partners:
TBXT
Uncharacterized protein.
   
 
 0.460
HOXB6
Homeobox domain-containing protein.
   
 
0.440
UNC5D
Uncharacterized protein.
    
 
 0.428
DBX1
Developing brain homeobox 1.
   
 
0.424
GATA3
Uncharacterized protein.
    
 
 0.412
GATA2
Uncharacterized protein.
    
 
 0.412
UNC5A
Unc-5 netrin receptor A.
    
 
 0.410
Your Current Organism:
Vombatus ursinus
NCBI taxonomy Id: 29139
Other names: V. ursinus, coarse-haired wombat, common wombat
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.