STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
REC8Uncharacterized protein. (588 aa)    
Predicted Functional Partners:
SMC3
Structural maintenance of chromosomes protein.
   
 0.996
SMC1A
Structural maintenance of chromosomes protein.
   
 0.993
SMC1B
Structural maintenance of chromosomes protein.
   
 0.993
STAG2
SCD domain-containing protein.
   
 0.988
STAG1
SCD domain-containing protein.
   
 0.988
ESPL1
Peptidase C50 domain-containing protein.
   
 0.988
NIPBL
Nipped-B protein.
   
 0.985
PDS5A
Uncharacterized protein.
   
 0.985
STAG3
Uncharacterized protein.
   
 0.983
PDS5B
Uncharacterized protein.
   
 0.979
Your Current Organism:
Vombatus ursinus
NCBI taxonomy Id: 29139
Other names: V. ursinus, coarse-haired wombat, common wombat
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.