STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
U2AF1Uncharacterized protein. (248 aa)    
Predicted Functional Partners:
U2AF2
U2 snRNP auxiliary factor large subunit; Necessary for the splicing of pre-mRNA. Belongs to the splicing factor SR family.
   
 0.996
SRSF1
Uncharacterized protein.
   
 0.915
SRSF2
RRM domain-containing protein.
   
 0.872
SRSF4
Uncharacterized protein.
   
 0.838
SRSF6
Uncharacterized protein.
   
 0.838
ENSVURP00010006693
RRM domain-containing protein.
   
 0.836
SRSF3
RRM domain-containing protein.
   
 0.836
RNPS1
RRM domain-containing protein.
   
 0.829
ENSVURP00010002539
RRM domain-containing protein.
   
 0.828
SRSF9
Uncharacterized protein.
   
 0.828
Your Current Organism:
Vombatus ursinus
NCBI taxonomy Id: 29139
Other names: V. ursinus, coarse-haired wombat, common wombat
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.