Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
LEO1 | POLR2A | ENSVURP00010006224 | ENSVURP00010003795 | Uncharacterized protein. | DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.960 |
LEO1 | POLR2B | ENSVURP00010006224 | ENSVURP00010014663 | Uncharacterized protein. | DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.999 |
LEO1 | POLR2C | ENSVURP00010006224 | ENSVURP00010022357 | Uncharacterized protein. | RPOLD domain-containing protein. | 0.999 |
LEO1 | POLR2E | ENSVURP00010006224 | ENSVURP00010022148 | Uncharacterized protein. | Uncharacterized protein. | 0.999 |
LEO1 | POLR2F | ENSVURP00010006224 | ENSVURP00010004557 | Uncharacterized protein. | Uncharacterized protein. | 0.999 |
LEO1 | POLR2G | ENSVURP00010006224 | ENSVURP00010001827 | Uncharacterized protein. | S1 domain-containing protein. | 0.999 |
LEO1 | POLR2K | ENSVURP00010006224 | ENSVURP00010008938 | Uncharacterized protein. | Uncharacterized protein. | 0.999 |
LEO1 | SUPT4H1 | ENSVURP00010006224 | ENSVURP00010016779 | Uncharacterized protein. | Spt4 domain-containing protein. | 0.999 |
LEO1 | SUPT5H | ENSVURP00010006224 | ENSVURP00010030562 | Uncharacterized protein. | Transcription elongation factor SPT5. | 0.999 |
POLR2A | LEO1 | ENSVURP00010003795 | ENSVURP00010006224 | DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | Uncharacterized protein. | 0.960 |
POLR2A | POLR2B | ENSVURP00010003795 | ENSVURP00010014663 | DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.999 |
POLR2A | POLR2C | ENSVURP00010003795 | ENSVURP00010022357 | DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | RPOLD domain-containing protein. | 0.999 |
POLR2A | POLR2E | ENSVURP00010003795 | ENSVURP00010022148 | DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | Uncharacterized protein. | 0.999 |
POLR2A | POLR2F | ENSVURP00010003795 | ENSVURP00010004557 | DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | Uncharacterized protein. | 0.999 |
POLR2A | POLR2G | ENSVURP00010003795 | ENSVURP00010001827 | DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | S1 domain-containing protein. | 0.999 |
POLR2A | POLR2K | ENSVURP00010003795 | ENSVURP00010008938 | DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | Uncharacterized protein. | 0.999 |
POLR2A | RNGTT | ENSVURP00010003795 | ENSVURP00010008225 | DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | Polynucleotide 5'-triphosphatase; Bifunctional mRNA-capping enzyme exhibiting RNA 5'- triphosphatase activity in the N-terminal part and mRNA guanylyltransferase activity in the C-terminal part. Catalyzes the first two steps of cap formation: by removing the gamma-phosphate from the 5'-triphosphate end of nascent mRNA to yield a diphosphate end, and by transferring the gmp moiety of GTP to the 5'-diphosphate terminus. | 0.997 |
POLR2A | SUPT4H1 | ENSVURP00010003795 | ENSVURP00010016779 | DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | Spt4 domain-containing protein. | 0.999 |
POLR2A | SUPT5H | ENSVURP00010003795 | ENSVURP00010030562 | DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | Transcription elongation factor SPT5. | 0.999 |
POLR2B | LEO1 | ENSVURP00010014663 | ENSVURP00010006224 | DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | Uncharacterized protein. | 0.999 |
page 1 of 6