STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LRRC47B3_4 domain-containing protein. (580 aa)    
Predicted Functional Partners:
FARSA
AA_TRNA_LIGASE_II domain-containing protein.
  
 0.998
FARS2
Phenylalanyl-tRNA synthetase 2, mitochondrial.
  
 0.996
FDXACB1
FDX-ACB domain-containing protein.
  
 0.996
YARS1
Tyrosine--tRNA ligase.
  
  
 0.964
LOC114049648
Uncharacterized protein.
  
 
 0.962
ENSVURP00010022295
annotation not available
  
 
 0.962
RPS18
Uncharacterized protein; Belongs to the universal ribosomal protein uS13 family.
  
 
 0.928
RIOK1
Serine/threonine-protein kinase RIO1; Belongs to the protein kinase superfamily. RIO-type Ser/Thr kinase family.
    
 
 0.926
IARS1
Uncharacterized protein; Belongs to the class-I aminoacyl-tRNA synthetase family.
  
 
 0.917
VARS1
GST C-terminal domain-containing protein; Belongs to the class-I aminoacyl-tRNA synthetase family.
  
  
 0.911
Your Current Organism:
Vombatus ursinus
NCBI taxonomy Id: 29139
Other names: V. ursinus, coarse-haired wombat, common wombat
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.