STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
macB_1ABC transporter ATP-binding protein. (414 aa)    
Predicted Functional Partners:
macB_3
Putative ABC transporter ATP-binding protein.
 0.983
macA_1
Membrane fusion efflux protein; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
 0.975
macB_8
ABC transporter ATP-binding protein.
 0.958
lolD_2
Putative ATP-binding component of ABC transporter.
 0.954
lolD_3
ABC transporter related protein.
 0.953
macA_3
Periplasmic protein of efflux system; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
 0.912
tolC_1
Putative outer membrane transport/efflux protein.
 
 0.905
lolD_1
Lipoprotein releasing system ATP-binding protein; Part of the ABC transporter complex LolCDE involved in the translocation of lipoproteins, in an ATP-dependent manner. Belongs to the ABC transporter superfamily. Lipoprotein translocase (TC 3.A.1.125) family.
 0.866
macB_2
ABC transporter permease.
 
   
0.821
cusC_2
Outer membrane efflux protein.
 
 0.706
Your Current Organism:
Bacteroides salyersiae
NCBI taxonomy Id: 291644
Other names: ATCC BAA-997, B. salyersiae, Bacteroides salyersae, Bacteroides salyersiae corrig. Song et al. 2005, Bacteroides sp. WAL 10018, CCUG 48945, DSM 18765, JCM 12988, WAL 10018
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