STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CUM77051.1Por secretion system C-terminal sorting domain. (570 aa)    
Predicted Functional Partners:
CUM77065.1
Por secretion system C-terminal sorting domain.
       0.782
CUM77080.1
Uncharacterised protein.
  
  
 0.678
CUM77044.1
Protein of uncharacterised function (DUF3244).
       0.565
CUM87447.1
Por secretion system C-terminal sorting domain.
  
  
 0.470
CUM85878.1
FG-GAP repeat.
     
 0.414
Your Current Organism:
Bacteroides salyersiae
NCBI taxonomy Id: 291644
Other names: ATCC BAA-997, B. salyersiae, Bacteroides salyersae, Bacteroides salyersiae corrig. Song et al. 2005, Bacteroides sp. WAL 10018, CCUG 48945, DSM 18765, JCM 12988, WAL 10018
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.