STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CUM78209.1SusD family. (481 aa)    
Predicted Functional Partners:
CUM78222.1
Outer membrane receptor proteins%2C mostly Fe transport.
 
 
   0.942
CUM93728.1
Outer membrane cobalamin receptor protein.
  
 
   0.805
CUN26584.1
TonB-dependent receptor plug.
  
 
   0.805
fepA_6
Putative TonB dependent outer membrane exported protein.
  
 
   0.798
fepA_7
Putative TonB-linked outer membrane receptor protein.
  
 
   0.791
CUM96083.1
Outer membrane receptor proteins%2C mostly Fe transport.
  
 
   0.775
CUM87203.1
TonB-dependent receptor plug.
  
 
   0.771
CUM88552.1
Outer membrane receptor proteins%2C mostly Fe transport.
  
 
   0.760
CUM78194.1
Uncharacterised protein.
       0.758
CUM87178.1
Outer membrane receptor proteins%2C mostly Fe transport.
  
 
   0.756
Your Current Organism:
Bacteroides salyersiae
NCBI taxonomy Id: 291644
Other names: ATCC BAA-997, B. salyersiae, Bacteroides salyersae, Bacteroides salyersiae corrig. Song et al. 2005, Bacteroides sp. WAL 10018, CCUG 48945, DSM 18765, JCM 12988, WAL 10018
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.