Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
CUM71525.1 | CUM85740.1 | ERS852428_00182 | ERS852428_01048 | Outer membrane receptor proteins%2C mostly Fe transport. | Chitobiase. | 0.717 |
CUM71525.1 | CUM85753.1 | ERS852428_00182 | ERS852428_01049 | Outer membrane receptor proteins%2C mostly Fe transport. | Uncharacterised protein. | 0.702 |
CUM71525.1 | CUM85762.1 | ERS852428_00182 | ERS852428_01050 | Outer membrane receptor proteins%2C mostly Fe transport. | RagB/SusD domain protein. | 0.792 |
CUM71525.1 | CUN08122.1 | ERS852428_00182 | ERS852428_02390 | Outer membrane receptor proteins%2C mostly Fe transport. | Putative lipoprotein. | 0.784 |
CUM75994.1 | CUM76068.1 | ERS852428_00512 | ERS852428_00518 | Fasciclin domain. | Uncharacterised protein. | 0.914 |
CUM75994.1 | CUM85740.1 | ERS852428_00512 | ERS852428_01048 | Fasciclin domain. | Chitobiase. | 0.715 |
CUM75994.1 | CUM85753.1 | ERS852428_00512 | ERS852428_01049 | Fasciclin domain. | Uncharacterised protein. | 0.682 |
CUM75994.1 | CUM85762.1 | ERS852428_00512 | ERS852428_01050 | Fasciclin domain. | RagB/SusD domain protein. | 0.567 |
CUM75994.1 | CUM85775.1 | ERS852428_00512 | ERS852428_01051 | Fasciclin domain. | Putative outer membrane protein. | 0.539 |
CUM76068.1 | CUM75994.1 | ERS852428_00518 | ERS852428_00512 | Uncharacterised protein. | Fasciclin domain. | 0.914 |
CUM76068.1 | CUM85740.1 | ERS852428_00518 | ERS852428_01048 | Uncharacterised protein. | Chitobiase. | 0.725 |
CUM76068.1 | CUM85753.1 | ERS852428_00518 | ERS852428_01049 | Uncharacterised protein. | Uncharacterised protein. | 0.697 |
CUM76068.1 | CUM85762.1 | ERS852428_00518 | ERS852428_01050 | Uncharacterised protein. | RagB/SusD domain protein. | 0.594 |
CUM76068.1 | CUM85775.1 | ERS852428_00518 | ERS852428_01051 | Uncharacterised protein. | Putative outer membrane protein. | 0.554 |
CUM85740.1 | CUM71525.1 | ERS852428_01048 | ERS852428_00182 | Chitobiase. | Outer membrane receptor proteins%2C mostly Fe transport. | 0.717 |
CUM85740.1 | CUM75994.1 | ERS852428_01048 | ERS852428_00512 | Chitobiase. | Fasciclin domain. | 0.715 |
CUM85740.1 | CUM76068.1 | ERS852428_01048 | ERS852428_00518 | Chitobiase. | Uncharacterised protein. | 0.725 |
CUM85740.1 | CUM85753.1 | ERS852428_01048 | ERS852428_01049 | Chitobiase. | Uncharacterised protein. | 0.945 |
CUM85740.1 | CUM85762.1 | ERS852428_01048 | ERS852428_01050 | Chitobiase. | RagB/SusD domain protein. | 0.920 |
CUM85740.1 | CUM85775.1 | ERS852428_01048 | ERS852428_01051 | Chitobiase. | Putative outer membrane protein. | 0.918 |
page 1 of 4