Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
CUM86616.1 | CUM86632.1 | ERS852428_01101 | ERS852428_01102 | Helix-turn-helix domain-containing protein. | Phage derived protein Gp49-like (DUF891). | 0.983 |
CUM86616.1 | trxA_2 | ERS852428_01101 | ERS852428_01100 | Helix-turn-helix domain-containing protein. | Putative thioredoxin; Belongs to the thioredoxin family. | 0.464 |
CUM86632.1 | CUM86616.1 | ERS852428_01102 | ERS852428_01101 | Phage derived protein Gp49-like (DUF891). | Helix-turn-helix domain-containing protein. | 0.983 |
CUM86632.1 | CUM93263.1 | ERS852428_01102 | ERS852428_01488 | Phage derived protein Gp49-like (DUF891). | Helix-turn-helix domain-containing protein. | 0.768 |
CUM86632.1 | CUM95748.1 | ERS852428_01102 | ERS852428_01659 | Phage derived protein Gp49-like (DUF891). | Predicted transcriptional regulator with C-terminal CBS domains. | 0.689 |
CUM86632.1 | trxA_2 | ERS852428_01102 | ERS852428_01100 | Phage derived protein Gp49-like (DUF891). | Putative thioredoxin; Belongs to the thioredoxin family. | 0.438 |
CUM93263.1 | CUM86632.1 | ERS852428_01488 | ERS852428_01102 | Helix-turn-helix domain-containing protein. | Phage derived protein Gp49-like (DUF891). | 0.768 |
CUM95748.1 | CUM86632.1 | ERS852428_01659 | ERS852428_01102 | Predicted transcriptional regulator with C-terminal CBS domains. | Phage derived protein Gp49-like (DUF891). | 0.689 |
trxA_2 | CUM86616.1 | ERS852428_01100 | ERS852428_01101 | Putative thioredoxin; Belongs to the thioredoxin family. | Helix-turn-helix domain-containing protein. | 0.464 |
trxA_2 | CUM86632.1 | ERS852428_01100 | ERS852428_01102 | Putative thioredoxin; Belongs to the thioredoxin family. | Phage derived protein Gp49-like (DUF891). | 0.438 |