Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
CUM94182.1 | CUM94197.1 | ERS852428_01546 | ERS852428_01547 | Carboxymuconolactone decarboxylase. | Flavodoxin. | 0.963 |
CUM94182.1 | CUM94229.1 | ERS852428_01546 | ERS852428_01549 | Carboxymuconolactone decarboxylase. | Putative acetyltransferase. | 0.588 |
CUM94182.1 | CUM94243.1 | ERS852428_01546 | ERS852428_01550 | Carboxymuconolactone decarboxylase. | Putative outer membrane protein. | 0.604 |
CUM94182.1 | bdhB | ERS852428_01546 | ERS852428_01548 | Carboxymuconolactone decarboxylase. | Iron-containing alcohol dehydrogenase. | 0.772 |
CUM94182.1 | fabG_1 | ERS852428_01546 | ERS852428_01551 | Carboxymuconolactone decarboxylase. | Putative 2%2C5-dichloro-2%2C5-cyclohexadiene-1%2C4-diol dehydrogenase. | 0.480 |
CUM94182.1 | iolS_3 | ERS852428_01546 | ERS852428_01552 | Carboxymuconolactone decarboxylase. | Putative aldo/keto reductase. | 0.405 |
CUM94197.1 | CUM94182.1 | ERS852428_01547 | ERS852428_01546 | Flavodoxin. | Carboxymuconolactone decarboxylase. | 0.963 |
CUM94197.1 | CUM94229.1 | ERS852428_01547 | ERS852428_01549 | Flavodoxin. | Putative acetyltransferase. | 0.589 |
CUM94197.1 | CUM94243.1 | ERS852428_01547 | ERS852428_01550 | Flavodoxin. | Putative outer membrane protein. | 0.587 |
CUM94197.1 | bdhB | ERS852428_01547 | ERS852428_01548 | Flavodoxin. | Iron-containing alcohol dehydrogenase. | 0.831 |
CUM94197.1 | fabG_1 | ERS852428_01547 | ERS852428_01551 | Flavodoxin. | Putative 2%2C5-dichloro-2%2C5-cyclohexadiene-1%2C4-diol dehydrogenase. | 0.543 |
CUM94197.1 | iolS_3 | ERS852428_01547 | ERS852428_01552 | Flavodoxin. | Putative aldo/keto reductase. | 0.622 |
CUM94229.1 | CUM94182.1 | ERS852428_01549 | ERS852428_01546 | Putative acetyltransferase. | Carboxymuconolactone decarboxylase. | 0.588 |
CUM94229.1 | CUM94197.1 | ERS852428_01549 | ERS852428_01547 | Putative acetyltransferase. | Flavodoxin. | 0.589 |
CUM94229.1 | CUM94243.1 | ERS852428_01549 | ERS852428_01550 | Putative acetyltransferase. | Putative outer membrane protein. | 0.773 |
CUM94229.1 | bdhB | ERS852428_01549 | ERS852428_01548 | Putative acetyltransferase. | Iron-containing alcohol dehydrogenase. | 0.587 |
CUM94229.1 | fabG_1 | ERS852428_01549 | ERS852428_01551 | Putative acetyltransferase. | Putative 2%2C5-dichloro-2%2C5-cyclohexadiene-1%2C4-diol dehydrogenase. | 0.502 |
CUM94229.1 | iolS_3 | ERS852428_01549 | ERS852428_01552 | Putative acetyltransferase. | Putative aldo/keto reductase. | 0.452 |
CUM94243.1 | CUM94182.1 | ERS852428_01550 | ERS852428_01546 | Putative outer membrane protein. | Carboxymuconolactone decarboxylase. | 0.604 |
CUM94243.1 | CUM94197.1 | ERS852428_01550 | ERS852428_01547 | Putative outer membrane protein. | Flavodoxin. | 0.587 |
page 1 of 2