STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
iolS_3Putative aldo/keto reductase. (387 aa)    
Predicted Functional Partners:
fabG_1
Putative 2%2C5-dichloro-2%2C5-cyclohexadiene-1%2C4-diol dehydrogenase.
 
 
 0.784
CUM94197.1
Flavodoxin.
  
 0.622
yvgN_2
2%2C5-didehydrogluconate reductase.
 
 0.574
bdhB
Iron-containing alcohol dehydrogenase.
  
 
 0.498
yvgN_1
Methylglyoxal reductase (NADPH-dependent).
  
 0.489
CUN28496.1
Putative peptidyl-prolyl cis-trans isomerase; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family.
    
 
 0.485
ycdF
Putative short-chain dehydrogenase.
 
 
 0.467
CUM93986.1
Putative aldo/keto reductase.
 
0.462
CUM94229.1
Putative acetyltransferase.
  
    0.452
CUM94243.1
Putative outer membrane protein.
   
   0.446
Your Current Organism:
Bacteroides salyersiae
NCBI taxonomy Id: 291644
Other names: ATCC BAA-997, B. salyersiae, Bacteroides salyersae, Bacteroides salyersiae corrig. Song et al. 2005, Bacteroides sp. WAL 10018, CCUG 48945, DSM 18765, JCM 12988, WAL 10018
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