STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CUN02209.1ABC transporter permease. (318 aa)    
Predicted Functional Partners:
ybhF_2
ABC-type multidrug transport system%2C ATPase component.
 
 0.994
CUN02188.1
NPCBM-associated%2C NEW3 domain of alpha-galactosidase.
 
    0.975
ybhF_3
ABC transporter ATP-binding protein.
  
 0.844
ybhF_1
Putative BAC transport system%2C two-fused ATP-binding domains protein.
  
 0.842
cysA_2
ABC-type multidrug transport system%2C ATPase component.
  
 0.842
CUN26448.1
N-acetylneuraminic acid mutarotase.
  
     0.446
CUM94753.1
Calcineurin-like phosphoesterase.
  
    0.436
CUN22167.1
RNA polymerase sigma factor%2C sigma-70 family/RNA polymerase sigma-70 factor%2C Bacteroides expansion family 1.
 
    0.426
CUN08122.1
Putative lipoprotein.
  
     0.402
CUN28201.1
Uncharacterised protein.
  
     0.400
Your Current Organism:
Bacteroides salyersiae
NCBI taxonomy Id: 291644
Other names: ATCC BAA-997, B. salyersiae, Bacteroides salyersae, Bacteroides salyersiae corrig. Song et al. 2005, Bacteroides sp. WAL 10018, CCUG 48945, DSM 18765, JCM 12988, WAL 10018
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