STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
yehT_4Two-component system response regulator. (264 aa)    
Predicted Functional Partners:
ypdA_3
Two-component system sensor kinase.
 
 0.980
yehU_1
Signal transduction histidine kinase%2C LytS.
 
 0.882
ypdA_2
Signal protein.
 
 0.872
ypdA_4
Signal transduction histidine kinase%2C LytS.
 
 0.872
yehU_2
Signal transduction histidine kinase%2C LytS.
 
 0.872
ypdA_5
Putative two component system%2C sensor protein.
 
 0.872
yehU_3
Putative two component system%2C sensor protein.
 
 0.872
ypdA_1
Putative two-component regulator sensor kinase.
 
 0.870
CUM79961.1
Signal transduction histidine kinase%2C LytS.
 
 
 0.836
yehT_1
Two-component system response regulator.
  
  
  0.826
Your Current Organism:
Bacteroides salyersiae
NCBI taxonomy Id: 291644
Other names: ATCC BAA-997, B. salyersiae, Bacteroides salyersae, Bacteroides salyersiae corrig. Song et al. 2005, Bacteroides sp. WAL 10018, CCUG 48945, DSM 18765, JCM 12988, WAL 10018
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.