STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CUN04466.1Uncharacterised protein. (222 aa)    
Predicted Functional Partners:
CUN04413.1
CorA-like Mg2+ transporter protein.
 
     0.910
CUN04370.1
CRISPR-associated protein Cas10/Cmr2%2C subtype III-B.
 
     0.858
cmr6
CRISPR type III-B/RAMP module RAMP protein Cmr6.
 
     0.826
CUN04451.1
NYN domain.
 
     0.810
CUN04344.1
CRISPR type III-B/RAMP module RAMP protein Cmr4.
 
     0.794
CUN04399.1
Uncharacterised protein.
       0.773
CUN04435.1
Uncharacterised protein.
       0.773
CUN04356.1
CRISPR type III-B/RAMP module-associated protein Cmr3.
       0.751
CUN04386.1
Uncharacterised protein.
       0.746
ltrA_4
Reverse transcriptase; CRISPR (clustered regularly interspaced short palindromic repeat), is an adaptive immune system that provides protection against mobile genetic elements (viruses, transposable elements and conjugative plasmids). CRISPR clusters contain spacers, sequences complementary to antecedent mobile elements, and target invading nucleic acids. CRISPR clusters are transcribed and processed into CRISPR RNA (crRNA). Acts as a dsDNA endonuclease. Involved in the integration of spacer DNA into the CRISPR cassette.
 
    0.684
Your Current Organism:
Bacteroides salyersiae
NCBI taxonomy Id: 291644
Other names: ATCC BAA-997, B. salyersiae, Bacteroides salyersae, Bacteroides salyersiae corrig. Song et al. 2005, Bacteroides sp. WAL 10018, CCUG 48945, DSM 18765, JCM 12988, WAL 10018
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