Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
CUN05902.1 | CUN05917.1 | ERS852428_02295 | ERS852428_02296 | Uncharacterised protein. | Uncharacterised protein. | 0.803 |
CUN05902.1 | CUN28496.1 | ERS852428_02295 | ERS852428_04281 | Uncharacterised protein. | Putative peptidyl-prolyl cis-trans isomerase; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family. | 0.831 |
CUN05902.1 | clpB_1 | ERS852428_02295 | ERS852428_02139 | Uncharacterised protein. | Negative regulator of genetic competence; Belongs to the ClpA/ClpB family. | 0.818 |
CUN05902.1 | clpB_2 | ERS852428_02295 | ERS852428_03793 | Uncharacterised protein. | ATP-dependent chaperone ClpB; Part of a stress-induced multi-chaperone system, it is involved in the recovery of the cell from heat-induced damage, in cooperation with DnaK, DnaJ and GrpE; Belongs to the ClpA/ClpB family. | 0.818 |
CUN05902.1 | dnaK2 | ERS852428_02295 | ERS852428_03779 | Uncharacterised protein. | Putative chaperone protein; Acts as a chaperone; Belongs to the heat shock protein 70 family. | 0.943 |
CUN05902.1 | grpE | ERS852428_02295 | ERS852428_03075 | Uncharacterised protein. | Heat shock protein GrpE; Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ; upon interaction with the DnaJ-bound protein, DnaK hydrolyzes its bound ATP, resulting in the formation of a stable complex. GrpE releases ADP from DnaK; ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP- [...] | 0.807 |
CUN05902.1 | htpG_1 | ERS852428_02295 | ERS852428_00890 | Uncharacterised protein. | Putative heat-shock protein. | 0.862 |
CUN05902.1 | htpG_2 | ERS852428_02295 | ERS852428_02140 | Uncharacterised protein. | Chaperone protein; Molecular chaperone. Has ATPase activity. | 0.862 |
CUN05902.1 | porA_3 | ERS852428_02295 | ERS852428_04028 | Uncharacterised protein. | Pyruvate ferredoxin/flavodoxin oxidoreductase. | 0.951 |
CUN05902.1 | rpsQ | ERS852428_02295 | ERS852428_04109 | Uncharacterised protein. | Putative 30S ribosomal protein S17; One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA. | 0.801 |
CUN05917.1 | CUN05902.1 | ERS852428_02296 | ERS852428_02295 | Uncharacterised protein. | Uncharacterised protein. | 0.803 |
CUN28496.1 | CUN05902.1 | ERS852428_04281 | ERS852428_02295 | Putative peptidyl-prolyl cis-trans isomerase; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family. | Uncharacterised protein. | 0.831 |
CUN28496.1 | dnaK2 | ERS852428_04281 | ERS852428_03779 | Putative peptidyl-prolyl cis-trans isomerase; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family. | Putative chaperone protein; Acts as a chaperone; Belongs to the heat shock protein 70 family. | 0.968 |
CUN28496.1 | htpG_1 | ERS852428_04281 | ERS852428_00890 | Putative peptidyl-prolyl cis-trans isomerase; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family. | Putative heat-shock protein. | 0.969 |
CUN28496.1 | htpG_2 | ERS852428_04281 | ERS852428_02140 | Putative peptidyl-prolyl cis-trans isomerase; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family. | Chaperone protein; Molecular chaperone. Has ATPase activity. | 0.969 |
CUN28496.1 | porA_3 | ERS852428_04281 | ERS852428_04028 | Putative peptidyl-prolyl cis-trans isomerase; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family. | Pyruvate ferredoxin/flavodoxin oxidoreductase. | 0.691 |
CUN28496.1 | rpsQ | ERS852428_04281 | ERS852428_04109 | Putative peptidyl-prolyl cis-trans isomerase; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family. | Putative 30S ribosomal protein S17; One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA. | 0.955 |
clpB_1 | CUN05902.1 | ERS852428_02139 | ERS852428_02295 | Negative regulator of genetic competence; Belongs to the ClpA/ClpB family. | Uncharacterised protein. | 0.818 |
clpB_1 | dnaK2 | ERS852428_02139 | ERS852428_03779 | Negative regulator of genetic competence; Belongs to the ClpA/ClpB family. | Putative chaperone protein; Acts as a chaperone; Belongs to the heat shock protein 70 family. | 0.957 |
clpB_1 | grpE | ERS852428_02139 | ERS852428_03075 | Negative regulator of genetic competence; Belongs to the ClpA/ClpB family. | Heat shock protein GrpE; Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ; upon interaction with the DnaJ-bound protein, DnaK hydrolyzes its bound ATP, resulting in the formation of a stable complex. GrpE releases ADP from DnaK; ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP- [...] | 0.804 |
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