STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CUN08485.1Uncharacterized protein encoded in toxicity protection region of plasmid R478%2C contains von Willebrand factor (vWF) domain. (236 aa)    
Predicted Functional Partners:
CUN08508.1
Uncharacterised protein.
 
    0.918
pknB
Serine/threonine protein kinase.
 
  
 0.885
CUN08536.1
Serine/threonine protein kinase.
 
  
 0.868
CUN08472.1
Uncharacterized protein encoded in toxicity protection region of plasmid R478%2C contains von Willebrand factor (vWF) domain.
 
    
0.680
pvuIIM
DNA methylase N-4/N-6 domain protein.
  
     0.628
CUN08441.1
Heat shock protein HtpX.
 
     0.609
CUN08458.1
Heat shock protein HtpX.
 
     0.601
CUN15880.1
Uncharacterised protein.
 
     0.594
CUN08424.1
RNA polymerase sigma factor SigY.
       0.524
CUN08432.1
Uncharacterised protein.
       0.524
Your Current Organism:
Bacteroides salyersiae
NCBI taxonomy Id: 291644
Other names: ATCC BAA-997, B. salyersiae, Bacteroides salyersae, Bacteroides salyersiae corrig. Song et al. 2005, Bacteroides sp. WAL 10018, CCUG 48945, DSM 18765, JCM 12988, WAL 10018
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