STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CUN13467.1Oxidoreductase. (513 aa)    
Predicted Functional Partners:
galK
Putative galactokinase; Belongs to the GHMP kinase family. GalK subfamily.
 
 0.732
CUM80983.1
Sugar phosphate isomerases/epimerases.
  
 
 0.703
CUN27573.1
Sugar phosphate isomerases/epimerases.
  
 
 0.703
arnB_2
DegT/DnrJ/EryC1/StrS aminotransferase; Belongs to the DegT/DnrJ/EryC1 family.
 
 
 0.599
CUM96935.1
Alpha-L-fucosidase.
  
     0.597
arnB_3
DegT/DnrJ/EryC1/StrS aminotransferase; Belongs to the DegT/DnrJ/EryC1 family.
 
 
 0.592
CUM82645.1
Phosphotransferase enzyme family.
 
     0.553
lysS
lysyl-tRNA synthetase; Belongs to the class-II aminoacyl-tRNA synthetase family.
  
    0.552
arnB_1
Putative aminotransferase; Belongs to the DegT/DnrJ/EryC1 family.
  
 
 0.539
arnB_4
Nucleotide sugar transaminase.
  
 
 0.539
Your Current Organism:
Bacteroides salyersiae
NCBI taxonomy Id: 291644
Other names: ATCC BAA-997, B. salyersiae, Bacteroides salyersae, Bacteroides salyersiae corrig. Song et al. 2005, Bacteroides sp. WAL 10018, CCUG 48945, DSM 18765, JCM 12988, WAL 10018
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