Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| CUM74006.1 | gcvP | ERS852428_00366 | ERS852428_02550 | Putative FAD-binding oxidoreductase. | Glycine dehydrogenase; The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein; Belongs to the GcvP family. | 0.695 |
| CUM74006.1 | ilvB | ERS852428_00366 | ERS852428_02776 | Putative FAD-binding oxidoreductase. | Putative acetolactate synthase large subunit. | 0.819 |
| CUM74006.1 | ldhA | ERS852428_00366 | ERS852428_01694 | Putative FAD-binding oxidoreductase. | Putative D-lactate dehydrogenase; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family. | 0.841 |
| CUM74006.1 | phnW | ERS852428_00366 | ERS852428_02906 | Putative FAD-binding oxidoreductase. | Putative aminotransferase; Involved in phosphonate degradation; Belongs to the class-V pyridoxal-phosphate-dependent aminotransferase family. PhnW subfamily. | 0.738 |
| CUM74006.1 | phnX | ERS852428_00366 | ERS852428_02905 | Putative FAD-binding oxidoreductase. | Putative hydrolase; Involved in phosphonate degradation; Belongs to the HAD-like hydrolase superfamily. PhnX family. | 0.927 |
| CUM74006.1 | porA_3 | ERS852428_00366 | ERS852428_04028 | Putative FAD-binding oxidoreductase. | Pyruvate ferredoxin/flavodoxin oxidoreductase. | 0.971 |
| CUM74006.1 | serB | ERS852428_00366 | ERS852428_02212 | Putative FAD-binding oxidoreductase. | Phosphoserine phosphatase. | 0.403 |
| CUN15651.1 | phnW | ERS852428_02904 | ERS852428_02906 | Putative transmembrane protein. | Putative aminotransferase; Involved in phosphonate degradation; Belongs to the class-V pyridoxal-phosphate-dependent aminotransferase family. PhnW subfamily. | 0.795 |
| CUN15651.1 | phnX | ERS852428_02904 | ERS852428_02905 | Putative transmembrane protein. | Putative hydrolase; Involved in phosphonate degradation; Belongs to the HAD-like hydrolase superfamily. PhnX family. | 0.836 |
| gcvP | CUM74006.1 | ERS852428_02550 | ERS852428_00366 | Glycine dehydrogenase; The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein; Belongs to the GcvP family. | Putative FAD-binding oxidoreductase. | 0.695 |
| gcvP | guaA | ERS852428_02550 | ERS852428_03228 | Glycine dehydrogenase; The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein; Belongs to the GcvP family. | GMP synthase; Catalyzes the synthesis of GMP from XMP. | 0.619 |
| gcvP | phnW | ERS852428_02550 | ERS852428_02906 | Glycine dehydrogenase; The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein; Belongs to the GcvP family. | Putative aminotransferase; Involved in phosphonate degradation; Belongs to the class-V pyridoxal-phosphate-dependent aminotransferase family. PhnW subfamily. | 0.742 |
| gcvP | phnX | ERS852428_02550 | ERS852428_02905 | Glycine dehydrogenase; The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein; Belongs to the GcvP family. | Putative hydrolase; Involved in phosphonate degradation; Belongs to the HAD-like hydrolase superfamily. PhnX family. | 0.764 |
| gcvP | porA_3 | ERS852428_02550 | ERS852428_04028 | Glycine dehydrogenase; The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein; Belongs to the GcvP family. | Pyruvate ferredoxin/flavodoxin oxidoreductase. | 0.787 |
| guaA | gcvP | ERS852428_03228 | ERS852428_02550 | GMP synthase; Catalyzes the synthesis of GMP from XMP. | Glycine dehydrogenase; The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein; Belongs to the GcvP family. | 0.619 |
| guaA | phnX | ERS852428_03228 | ERS852428_02905 | GMP synthase; Catalyzes the synthesis of GMP from XMP. | Putative hydrolase; Involved in phosphonate degradation; Belongs to the HAD-like hydrolase superfamily. PhnX family. | 0.759 |
| guaA | serB | ERS852428_03228 | ERS852428_02212 | GMP synthase; Catalyzes the synthesis of GMP from XMP. | Phosphoserine phosphatase. | 0.773 |
| ilvB | CUM74006.1 | ERS852428_02776 | ERS852428_00366 | Putative acetolactate synthase large subunit. | Putative FAD-binding oxidoreductase. | 0.819 |
| ilvB | ldhA | ERS852428_02776 | ERS852428_01694 | Putative acetolactate synthase large subunit. | Putative D-lactate dehydrogenase; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family. | 0.847 |
| ilvB | otsA | ERS852428_02776 | ERS852428_03866 | Putative acetolactate synthase large subunit. | Bifunctional trehalose-6-phosphate synthase/HAD hydrolase. | 0.507 |
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