Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
CUN17017.1 | CUN17029.1 | ERS852428_02964 | ERS852428_02965 | Uncharacterised protein. | Uncharacterised protein. | 0.793 |
CUN17017.1 | CUN17038.1 | ERS852428_02964 | ERS852428_02966 | Uncharacterised protein. | Uncharacterised protein. | 0.730 |
CUN17017.1 | sigE | ERS852428_02964 | ERS852428_02967 | Uncharacterised protein. | RNA polymerase ECF-type sigma factor; Belongs to the sigma-70 factor family. ECF subfamily. | 0.753 |
CUN17029.1 | CUN17017.1 | ERS852428_02965 | ERS852428_02964 | Uncharacterised protein. | Uncharacterised protein. | 0.793 |
CUN17029.1 | CUN17038.1 | ERS852428_02965 | ERS852428_02966 | Uncharacterised protein. | Uncharacterised protein. | 0.688 |
CUN17029.1 | sigE | ERS852428_02965 | ERS852428_02967 | Uncharacterised protein. | RNA polymerase ECF-type sigma factor; Belongs to the sigma-70 factor family. ECF subfamily. | 0.782 |
CUN17038.1 | CUN17017.1 | ERS852428_02966 | ERS852428_02964 | Uncharacterised protein. | Uncharacterised protein. | 0.730 |
CUN17038.1 | CUN17029.1 | ERS852428_02966 | ERS852428_02965 | Uncharacterised protein. | Uncharacterised protein. | 0.688 |
CUN17038.1 | sigE | ERS852428_02966 | ERS852428_02967 | Uncharacterised protein. | RNA polymerase ECF-type sigma factor; Belongs to the sigma-70 factor family. ECF subfamily. | 0.882 |
cnrH_4 | rpoE_11 | ERS852428_03728 | ERS852428_04147 | RNA polymerase sigma factor%2C sigma-70 family; Belongs to the sigma-70 factor family. ECF subfamily. | RNA polymerase sigma factor%2C sigma-70 family/RNA polymerase sigma-70 factor%2C Bacteroides expansion family 1; Belongs to the sigma-70 factor family. ECF subfamily. | 0.735 |
cnrH_4 | rpoE_8 | ERS852428_03728 | ERS852428_03621 | RNA polymerase sigma factor%2C sigma-70 family; Belongs to the sigma-70 factor family. ECF subfamily. | RNA polymerase ECF-type sigma factor; Belongs to the sigma-70 factor family. ECF subfamily. | 0.773 |
cnrH_4 | sigE | ERS852428_03728 | ERS852428_02967 | RNA polymerase sigma factor%2C sigma-70 family; Belongs to the sigma-70 factor family. ECF subfamily. | RNA polymerase ECF-type sigma factor; Belongs to the sigma-70 factor family. ECF subfamily. | 0.674 |
rpoE_10 | rpoE_11 | ERS852428_03954 | ERS852428_04147 | Putative RNA polymerase sigma factor; Belongs to the sigma-70 factor family. ECF subfamily. | RNA polymerase sigma factor%2C sigma-70 family/RNA polymerase sigma-70 factor%2C Bacteroides expansion family 1; Belongs to the sigma-70 factor family. ECF subfamily. | 0.765 |
rpoE_10 | sigE | ERS852428_03954 | ERS852428_02967 | Putative RNA polymerase sigma factor; Belongs to the sigma-70 factor family. ECF subfamily. | RNA polymerase ECF-type sigma factor; Belongs to the sigma-70 factor family. ECF subfamily. | 0.593 |
rpoE_11 | cnrH_4 | ERS852428_04147 | ERS852428_03728 | RNA polymerase sigma factor%2C sigma-70 family/RNA polymerase sigma-70 factor%2C Bacteroides expansion family 1; Belongs to the sigma-70 factor family. ECF subfamily. | RNA polymerase sigma factor%2C sigma-70 family; Belongs to the sigma-70 factor family. ECF subfamily. | 0.735 |
rpoE_11 | rpoE_10 | ERS852428_04147 | ERS852428_03954 | RNA polymerase sigma factor%2C sigma-70 family/RNA polymerase sigma-70 factor%2C Bacteroides expansion family 1; Belongs to the sigma-70 factor family. ECF subfamily. | Putative RNA polymerase sigma factor; Belongs to the sigma-70 factor family. ECF subfamily. | 0.765 |
rpoE_11 | rpoE_7 | ERS852428_04147 | ERS852428_03320 | RNA polymerase sigma factor%2C sigma-70 family/RNA polymerase sigma-70 factor%2C Bacteroides expansion family 1; Belongs to the sigma-70 factor family. ECF subfamily. | RNA polymerase ECF-type sigma factor; Belongs to the sigma-70 factor family. ECF subfamily. | 0.752 |
rpoE_11 | rpoE_8 | ERS852428_04147 | ERS852428_03621 | RNA polymerase sigma factor%2C sigma-70 family/RNA polymerase sigma-70 factor%2C Bacteroides expansion family 1; Belongs to the sigma-70 factor family. ECF subfamily. | RNA polymerase ECF-type sigma factor; Belongs to the sigma-70 factor family. ECF subfamily. | 0.759 |
rpoE_11 | sigE | ERS852428_04147 | ERS852428_02967 | RNA polymerase sigma factor%2C sigma-70 family/RNA polymerase sigma-70 factor%2C Bacteroides expansion family 1; Belongs to the sigma-70 factor family. ECF subfamily. | RNA polymerase ECF-type sigma factor; Belongs to the sigma-70 factor family. ECF subfamily. | 0.565 |
rpoE_11 | sigM_4 | ERS852428_04147 | ERS852428_01679 | RNA polymerase sigma factor%2C sigma-70 family/RNA polymerase sigma-70 factor%2C Bacteroides expansion family 1; Belongs to the sigma-70 factor family. ECF subfamily. | Putative RNA polymerase ECF-type sigma factor; Belongs to the sigma-70 factor family. ECF subfamily. | 0.763 |
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