STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
mro_5Aldose 1-epimerase; Converts alpha-aldose to the beta-anomer. (366 aa)    
Predicted Functional Partners:
galK
Putative galactokinase; Belongs to the GHMP kinase family. GalK subfamily.
 0.951
gmuF_2
Mannose-6-phosphate isomerase.
    
 0.590
glcK
Putative ROK family transcriptional repressor.
  
 
 0.585
bga_2
Beta-galactosidase; Belongs to the glycosyl hydrolase 35 family.
  
 
 0.569
yihX_1
Haloacid dehalogenase.
   
 
  0.564
fucP_3
Putative transmembrane glucose/galactose transporter.
  
  
 0.544
galE_1
UDP-glucose 4-epimerase; Belongs to the NAD(P)-dependent epimerase/dehydratase family.
 
 
 0.510
lacZ_14
Beta-galactosidase; Belongs to the glycosyl hydrolase 2 family.
   
 
  0.491
rafA
Alpha-galactosidase.
  
 
  0.465
aga
Putative melibiase.
  
 
  0.465
Your Current Organism:
Bacteroides salyersiae
NCBI taxonomy Id: 291644
Other names: ATCC BAA-997, B. salyersiae, Bacteroides salyersae, Bacteroides salyersiae corrig. Song et al. 2005, Bacteroides sp. WAL 10018, CCUG 48945, DSM 18765, JCM 12988, WAL 10018
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