STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CUN19500.1Uncharacterised protein. (189 aa)    
Predicted Functional Partners:
CUN19525.1
Uncharacterised protein.
 
    0.947
CUN19536.1
Uncharacterised protein.
 
    0.937
ybhF_3
ABC transporter ATP-binding protein.
 
    0.899
CUN19491.1
Putative lipoprotein.
  
    0.866
CUN19465.1
Uncharacterised protein.
 
    0.827
CUN19457.1
Putative lipoprotein.
 
    0.766
CUN19443.1
Outer membrane receptor protein.
 
     0.745
CUN19477.1
Collagen triple helix repeat-containing protein.
       0.671
CUM69506.1
Chondroitinase; Broad-specificity glycosaminoglycan lyase.
  
     0.653
CUM69672.1
Chondroitin sulfate ABC lyase; Broad-specificity glycosaminoglycan lyase.
  
     0.642
Your Current Organism:
Bacteroides salyersiae
NCBI taxonomy Id: 291644
Other names: ATCC BAA-997, B. salyersiae, Bacteroides salyersae, Bacteroides salyersiae corrig. Song et al. 2005, Bacteroides sp. WAL 10018, CCUG 48945, DSM 18765, JCM 12988, WAL 10018
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.