Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
CUM69989.1 | CUM82044.1 | ERS852428_00074 | ERS852428_00915 | Putative SNF family helicase. | Helicase. | 0.951 |
CUM69989.1 | CUM85812.1 | ERS852428_00074 | ERS852428_01054 | Putative SNF family helicase. | Putative TPR-domain protein. | 0.550 |
CUM69989.1 | CUM87502.1 | ERS852428_00074 | ERS852428_01159 | Putative SNF family helicase. | Two component regulator three Y domain-containing protein. | 0.550 |
CUM69989.1 | CUN01356.1 | ERS852428_00074 | ERS852428_01977 | Putative SNF family helicase. | RNA polymerase Rpb6. | 0.980 |
CUM69989.1 | luxQ_1 | ERS852428_00074 | ERS852428_00406 | Putative SNF family helicase. | Signal transduction histidine kinase. | 0.597 |
CUM69989.1 | rpoA | ERS852428_00074 | ERS852428_04127 | Putative SNF family helicase. | Putative DNA-directed RNA polymerase alpha chain; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.979 |
CUM69989.1 | rpoB | ERS852428_00074 | ERS852428_04088 | Putative SNF family helicase. | Putative DNA-directed RNA polymerase beta chain; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.980 |
CUM69989.1 | yhgF | ERS852428_00074 | ERS852428_03185 | Putative SNF family helicase. | RNA-binding protein. | 0.738 |
CUM69989.1 | yrrB_1 | ERS852428_00074 | ERS852428_02682 | Putative SNF family helicase. | Tetratricopeptide repeat. | 0.552 |
CUM82044.1 | CUM69989.1 | ERS852428_00915 | ERS852428_00074 | Helicase. | Putative SNF family helicase. | 0.951 |
CUM82044.1 | CUM85812.1 | ERS852428_00915 | ERS852428_01054 | Helicase. | Putative TPR-domain protein. | 0.552 |
CUM82044.1 | CUN01356.1 | ERS852428_00915 | ERS852428_01977 | Helicase. | RNA polymerase Rpb6. | 0.560 |
CUM82044.1 | CUN08346.1 | ERS852428_00915 | ERS852428_02408 | Helicase. | Superfamily II DNA/RNA helicases%2C SNF2 family. | 0.951 |
CUM82044.1 | rpoA | ERS852428_00915 | ERS852428_04127 | Helicase. | Putative DNA-directed RNA polymerase alpha chain; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.654 |
CUM82044.1 | rpoB | ERS852428_00915 | ERS852428_04088 | Helicase. | Putative DNA-directed RNA polymerase beta chain; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.674 |
CUM82044.1 | yhgF | ERS852428_00915 | ERS852428_03185 | Helicase. | RNA-binding protein. | 0.696 |
CUM82044.1 | yrrB_1 | ERS852428_00915 | ERS852428_02682 | Helicase. | Tetratricopeptide repeat. | 0.632 |
CUM85812.1 | CUM69989.1 | ERS852428_01054 | ERS852428_00074 | Putative TPR-domain protein. | Putative SNF family helicase. | 0.550 |
CUM85812.1 | CUM82044.1 | ERS852428_01054 | ERS852428_00915 | Putative TPR-domain protein. | Helicase. | 0.552 |
CUM85812.1 | CUM87502.1 | ERS852428_01054 | ERS852428_01159 | Putative TPR-domain protein. | Two component regulator three Y domain-containing protein. | 0.426 |
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