Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
CUM93858.1 | atsA_7 | ERS852428_01526 | ERS852428_03201 | D-mannonate oxidoreductase. | Putative secreted sulfatase. | 0.580 |
CUN19842.1 | CUN19866.1 | ERS852428_03200 | ERS852428_03202 | Uncharacterised protein. | long-chain-fatty-acid--CoA ligase. | 0.636 |
CUN19842.1 | atsA_7 | ERS852428_03200 | ERS852428_03201 | Uncharacterised protein. | Putative secreted sulfatase. | 0.798 |
CUN19866.1 | CUN19842.1 | ERS852428_03202 | ERS852428_03200 | long-chain-fatty-acid--CoA ligase. | Uncharacterised protein. | 0.636 |
CUN19866.1 | atsA_7 | ERS852428_03202 | ERS852428_03201 | long-chain-fatty-acid--CoA ligase. | Putative secreted sulfatase. | 0.632 |
acr1 | atsA_7 | ERS852428_02786 | ERS852428_03201 | Oxidoreductase. | Putative secreted sulfatase. | 0.580 |
acr1 | fabG_1 | ERS852428_02786 | ERS852428_01551 | Oxidoreductase. | Putative 2%2C5-dichloro-2%2C5-cyclohexadiene-1%2C4-diol dehydrogenase. | 0.551 |
acr1 | fabG_3 | ERS852428_02786 | ERS852428_02330 | Oxidoreductase. | Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases). | 0.564 |
acr1 | polS | ERS852428_02786 | ERS852428_01287 | Oxidoreductase. | Oxidoreductase. | 0.484 |
atsA_7 | CUM93858.1 | ERS852428_03201 | ERS852428_01526 | Putative secreted sulfatase. | D-mannonate oxidoreductase. | 0.580 |
atsA_7 | CUN19842.1 | ERS852428_03201 | ERS852428_03200 | Putative secreted sulfatase. | Uncharacterised protein. | 0.798 |
atsA_7 | CUN19866.1 | ERS852428_03201 | ERS852428_03202 | Putative secreted sulfatase. | long-chain-fatty-acid--CoA ligase. | 0.632 |
atsA_7 | acr1 | ERS852428_03201 | ERS852428_02786 | Putative secreted sulfatase. | Oxidoreductase. | 0.580 |
atsA_7 | chuR | ERS852428_03201 | ERS852428_03717 | Putative secreted sulfatase. | Putative regulatory protein. | 0.596 |
atsA_7 | fabG_1 | ERS852428_03201 | ERS852428_01551 | Putative secreted sulfatase. | Putative 2%2C5-dichloro-2%2C5-cyclohexadiene-1%2C4-diol dehydrogenase. | 0.580 |
atsA_7 | fabG_3 | ERS852428_03201 | ERS852428_02330 | Putative secreted sulfatase. | Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases). | 0.580 |
atsA_7 | gno | ERS852428_03201 | ERS852428_01397 | Putative secreted sulfatase. | Putative gluconate 5-dehydrogenase. | 0.580 |
atsA_7 | polS | ERS852428_03201 | ERS852428_01287 | Putative secreted sulfatase. | Oxidoreductase. | 0.580 |
atsA_7 | ycdF | ERS852428_03201 | ERS852428_01544 | Putative secreted sulfatase. | Putative short-chain dehydrogenase. | 0.580 |
chuR | atsA_7 | ERS852428_03717 | ERS852428_03201 | Putative regulatory protein. | Putative secreted sulfatase. | 0.596 |
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