STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CUN21076.1Putative outer membrane protein. (1028 aa)    
Predicted Functional Partners:
CUN21084.1
Liporotein.
 
     0.930
CUN21071.1
Peptidase M10A/M12B.
 
     0.915
CUN21096.1
M6 family metalloprotease domain.
 
     0.855
CUN08289.1
Por secretion system C-terminal sorting domain.
  
     0.762
CUN17384.1
Por secretion system C-terminal sorting domain.
  
     0.760
CUN22327.1
Outer membrane protein.
  
     0.759
CUN22144.1
RagB/SusD domain-containing protein.
  
     0.746
CUM85878.1
FG-GAP repeat.
  
     0.744
inlJ_2
Peptidoglycan binding protein.
 
     0.733
CUM69595.1
RagB/SusD domain protein.
  
     0.725
Your Current Organism:
Bacteroides salyersiae
NCBI taxonomy Id: 291644
Other names: ATCC BAA-997, B. salyersiae, Bacteroides salyersae, Bacteroides salyersiae corrig. Song et al. 2005, Bacteroides sp. WAL 10018, CCUG 48945, DSM 18765, JCM 12988, WAL 10018
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