STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CUN22245.1Uncharacterised protein. (290 aa)    
Predicted Functional Partners:
CUM87861.1
Tetratricopeptide repeat.
  
     0.764
CUN21640.1
Uncharacterised protein.
  
     0.760
CUM96834.1
Outer membrane chaperone Skp.
  
     0.720
CUN25233.1
WD40-like Beta Propeller Repeat.
  
     0.697
CUN20945.1
Uncharacterised protein.
  
     0.671
CUN21060.1
Uncharacterised protein.
  
     0.670
mdh_2
Putative malate dehydrogenase; Catalyzes the reversible oxidation of malate to oxaloacetate. Belongs to the LDH/MDH superfamily. MDH type 3 family.
  
    0.651
CUM72584.1
Cell division protein FtsQ.
  
     0.646
CUN01786.1
Positive regulator of sigma(E)%2C RseC/MucC.
  
     0.611
CUN17813.1
Putative exported Tpr repeat-family protein.
  
     0.604
Your Current Organism:
Bacteroides salyersiae
NCBI taxonomy Id: 291644
Other names: ATCC BAA-997, B. salyersiae, Bacteroides salyersae, Bacteroides salyersiae corrig. Song et al. 2005, Bacteroides sp. WAL 10018, CCUG 48945, DSM 18765, JCM 12988, WAL 10018
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.