STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CUN28196.1Glycosyl hydrolase catalytic core. (924 aa)    
Predicted Functional Partners:
CUN28190.1
Uncharacterised protein.
       0.737
CUN24697.1
Uncharacterised protein.
  
     0.665
CUN08183.1
Glycosyl hydrolase family protein.
  
     0.615
yteR_8
Glycosyl hydrolase family protein.
  
     0.614
CUN28187.1
RagB/SusD domain protein.
   
   0.574
yteR_5
Uncharacterized protein; Predicted unsaturated glucuronyl hydrolase involved in regulation of bacterial surface properties%2C and related proteins.
  
     0.564
rhgT_1
Carbohydrate esterase family 12 protein.
  
     0.540
CUN05752.1
Putative helicase.
  
     0.525
yesY
Rhamnogalacturonan acetylesterase.
  
     0.509
rpoC
DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
    
 0.501
Your Current Organism:
Bacteroides salyersiae
NCBI taxonomy Id: 291644
Other names: ATCC BAA-997, B. salyersiae, Bacteroides salyersae, Bacteroides salyersiae corrig. Song et al. 2005, Bacteroides sp. WAL 10018, CCUG 48945, DSM 18765, JCM 12988, WAL 10018
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