STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ANCCAN_21435Uncharacterized protein. (254 aa)    
Predicted Functional Partners:
ANCCAN_00556
Brix domain protein.
   
  
 0.917
ANCCAN_01475
H/ACA ribonucleoprotein complex subunit; Required for ribosome biogenesis. Part of a complex which catalyzes pseudouridylation of rRNA. This involves the isomerization of uridine such that the ribose is subsequently attached to C5, instead of the normal N1. Pseudouridine ("psi") residues may serve to stabilize the conformation of rRNAs.
   
   0.848
ANCCAN_17389
PUA domain-containing protein.
  
 
 0.833
ANCCAN_21535
CBF/Mak21 family protein.
   
    0.778
ANCCAN_22374
TruB_N domain-containing protein.
  
 
 0.749
ANCCAN_04129
TruB_N domain-containing protein.
  
 
 0.749
ANCCAN_04957
Utp21 specific WD40 associated domain protein.
   
    0.748
ANCCAN_02272
Brix domain protein.
   
    0.738
ANCCAN_05873
NUC153 domain protein.
   
   0.719
ANCCAN_04671
Protein SDA1; Required for 60S pre-ribosomal subunits export to the cytoplasm; Belongs to the SDA1 family.
   
   0.703
Your Current Organism:
Ancylostoma caninum
NCBI taxonomy Id: 29170
Other names: A. caninum, dog hookworm
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