STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DICVIV_13011LPS glycosyltransferase. (345 aa)    
Predicted Functional Partners:
DICVIV_03649
Uncharacterized protein.
   
 0.855
DICVIV_03651
Oxidoreductase, 2OG-Fe(II) oxygenase family protein.
   
 0.855
DICVIV_03650
Uncharacterized protein.
   
 0.855
DICVIV_09955
Kunitz/Bovine pancreatic trypsin inhibitor domain protein.
   
 
  0.575
DICVIV_13401
Protein kinase C; Belongs to the protein kinase superfamily. AGC Ser/Thr protein kinase family. PKC subfamily.
     
 0.534
DICVIV_11424
AMP-binding enzyme.
 
   
  0.534
DICVIV_09131
AMP-binding enzyme.
 
   
  0.527
DICVIV_07249
Uncharacterized protein.
    
  0.524
DICVIV_07248
Collagenase NC10 and Endostatin.
    
  0.524
DICVIV_07250
Fibronectin type III domain protein.
    
  0.524
Your Current Organism:
Dictyocaulus viviparus
NCBI taxonomy Id: 29172
Other names: D. viviparus, Dictyocaulus sp. AMP-2014, bovine lungworm
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