Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
DICVIV_00284 | DICVIV_03662 | A0A0D8YBV6 | A0A0D8Y043 | Uncharacterized protein. | Apurinic endonuclease. | 0.616 |
DICVIV_00284 | DICVIV_09800 | A0A0D8YBV6 | A0A0D8XK72 | Uncharacterized protein. | DNA ligase. | 0.987 |
DICVIV_00284 | DICVIV_11481 | A0A0D8YBV6 | A0A0D8XFL5 | Uncharacterized protein. | DNA-(apurinic or apyrimidinic site) lyase; Belongs to the DNA repair enzymes AP/ExoA family. | 0.888 |
DICVIV_00284 | DICVIV_12826 | A0A0D8YBV6 | A0A0D8XBU6 | Uncharacterized protein. | Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family. | 0.993 |
DICVIV_00284 | NTH1 | A0A0D8YBV6 | A0A0D8Y0Z0 | Uncharacterized protein. | Endonuclease III homolog; Bifunctional DNA N-glycosylase with associated apurinic/apyrimidinic (AP) lyase function that catalyzes the first step in base excision repair (BER), the primary repair pathway for the repair of oxidative DNA damage. The DNA N-glycosylase activity releases the damaged DNA base from DNA by cleaving the N-glycosidic bond, leaving an AP site. The AP lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination. Primarily recognizes and repairs oxidative base damage of pyrimidines; Belongs to the Nth/MutY family. | 0.709 |
DICVIV_00467 | DICVIV_02935 | A0A0D8YBF1 | A0A0D8Y8H8 | LSM domain protein. | LSM domain protein; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family. | 0.999 |
DICVIV_00467 | DICVIV_03390 | A0A0D8YBF1 | A0A0D8Y0Q8 | LSM domain protein. | Small nuclear ribonucleoprotein Sm D2. | 0.999 |
DICVIV_00467 | DICVIV_07131 | A0A0D8YBF1 | A0A0D8XQL3 | LSM domain protein. | LSM domain protein. | 0.999 |
DICVIV_00467 | DICVIV_11481 | A0A0D8YBF1 | A0A0D8XFL5 | LSM domain protein. | DNA-(apurinic or apyrimidinic site) lyase; Belongs to the DNA repair enzymes AP/ExoA family. | 0.886 |
DICVIV_02935 | DICVIV_00467 | A0A0D8Y8H8 | A0A0D8YBF1 | LSM domain protein; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family. | LSM domain protein. | 0.999 |
DICVIV_02935 | DICVIV_03390 | A0A0D8Y8H8 | A0A0D8Y0Q8 | LSM domain protein; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family. | Small nuclear ribonucleoprotein Sm D2. | 0.999 |
DICVIV_02935 | DICVIV_07131 | A0A0D8Y8H8 | A0A0D8XQL3 | LSM domain protein; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family. | LSM domain protein. | 0.999 |
DICVIV_02935 | DICVIV_11481 | A0A0D8Y8H8 | A0A0D8XFL5 | LSM domain protein; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family. | DNA-(apurinic or apyrimidinic site) lyase; Belongs to the DNA repair enzymes AP/ExoA family. | 0.892 |
DICVIV_03390 | DICVIV_00467 | A0A0D8Y0Q8 | A0A0D8YBF1 | Small nuclear ribonucleoprotein Sm D2. | LSM domain protein. | 0.999 |
DICVIV_03390 | DICVIV_02935 | A0A0D8Y0Q8 | A0A0D8Y8H8 | Small nuclear ribonucleoprotein Sm D2. | LSM domain protein; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family. | 0.999 |
DICVIV_03390 | DICVIV_07131 | A0A0D8Y0Q8 | A0A0D8XQL3 | Small nuclear ribonucleoprotein Sm D2. | LSM domain protein. | 0.999 |
DICVIV_03390 | DICVIV_11481 | A0A0D8Y0Q8 | A0A0D8XFL5 | Small nuclear ribonucleoprotein Sm D2. | DNA-(apurinic or apyrimidinic site) lyase; Belongs to the DNA repair enzymes AP/ExoA family. | 0.887 |
DICVIV_03662 | DICVIV_00284 | A0A0D8Y043 | A0A0D8YBV6 | Apurinic endonuclease. | Uncharacterized protein. | 0.616 |
DICVIV_03662 | DICVIV_09800 | A0A0D8Y043 | A0A0D8XK72 | Apurinic endonuclease. | DNA ligase. | 0.610 |
DICVIV_03662 | DICVIV_11481 | A0A0D8Y043 | A0A0D8XFL5 | Apurinic endonuclease. | DNA-(apurinic or apyrimidinic site) lyase; Belongs to the DNA repair enzymes AP/ExoA family. | 0.996 |
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