STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DICVIV_09717Cyclin ccl1. (318 aa)    
Predicted Functional Partners:
DICVIV_01167
CDK-activating kinase assembly factor MAT1.
   
 0.999
DICVIV_12092
Transcription initiation factor IIE subunit beta; Recruits TFIIH to the initiation complex and stimulates the RNA polymerase II C-terminal domain kinase and DNA-dependent ATPase activities of TFIIH. Both TFIIH and TFIIE are required for promoter clearance by RNA polymerase.
    
 0.998
DICVIV_06320
TFIIE alpha subunit.
    
 0.998
DICVIV_05061
DNA repair helicase.
    
 0.997
DICVIV_10158
Kinase domain protein; Belongs to the protein kinase superfamily.
    
 0.994
DICVIV_05972
Putative serine--tRNA ligase.
    
 0.994
DICVIV_03360
Transcription factor ssl1.
   
 0.992
DICVIV_09252
Protein kinase domain-containing protein.
    
 0.989
DICVIV_00750
Uncharacterized protein.
   
 0.984
DICVIV_00751
Uncharacterized protein.
   
 0.984
Your Current Organism:
Dictyocaulus viviparus
NCBI taxonomy Id: 29172
Other names: D. viviparus, Dictyocaulus sp. AMP-2014, bovine lungworm
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