STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DICVIV_09199SarA; Belongs to the small GTPase superfamily. SAR1 family. (194 aa)    
Predicted Functional Partners:
DICVIV_12034
WD domain, G-beta repeat protein.
   
 0.996
DICVIV_03208
Protein transport protein SEC23; Component of the coat protein complex II (COPII) which promotes the formation of transport vesicles from the endoplasmic reticulum (ER). The coat has two main functions, the physical deformation of the endoplasmic reticulum membrane into vesicles and the selection of cargo molecules; Belongs to the SEC23/SEC24 family. SEC23 subfamily.
    
 0.995
DICVIV_06278
WD domain, G-beta repeat protein.
   
 0.993
DICVIV_02294
Ankyrin repeat protein.
   
 0.983
DICVIV_10300
WD domain, G-beta repeat protein; Belongs to the WD repeat SEC13 family.
   
 0.977
DICVIV_08018
Sec23/Sec24 beta-sandwich domain protein.
   
 0.965
DICVIV_08017
Sec23/Sec24 trunk domain protein.
   
 0.965
DICVIV_12610
Protein transport protein sec16.
    
 0.923
DICVIV_09107
Sec23/Sec24 trunk domain protein.
   
 
 0.911
DICVIV_04716
Emp24/gp25L/p24 family protein.
   
 0.877
Your Current Organism:
Dictyocaulus viviparus
NCBI taxonomy Id: 29172
Other names: D. viviparus, Dictyocaulus sp. AMP-2014, bovine lungworm
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