STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DICVIV_10536Ribosome associated membrane protein RAMP4. (64 aa)    
Predicted Functional Partners:
DICVIV_01153
Protein transport protein Sec61 subunit beta; Necessary for protein translocation in the endoplasmic reticulum.
   
 
 0.801
DICVIV_07173
TPR_REGION domain-containing protein.
    
 0.651
DICVIV_07172
Tetratricopeptide repeat protein.
    
 0.651
DICVIV_02374
Cytochrome b5-like Heme/Steroid binding domain protein; Belongs to the cytochrome b5 family.
     
 0.650
DICVIV_06856
Uncharacterized protein.
     
 0.603
DICVIV_10105
Syntaxin-5_N domain-containing protein.
     
 0.596
DICVIV_10104
SNARE domain protein; Belongs to the syntaxin family.
     
 0.596
DICVIV_11848
Cytochrome b5 family protein; Belongs to the cytochrome b5 family.
     
 0.578
DICVIV_00211
Cytochrome b5-like Heme/Steroid binding domain protein; Belongs to the cytochrome b5 family.
     
 0.578
DICVIV_05223
BZIP transcription factor.
   
 
 0.547
Your Current Organism:
Dictyocaulus viviparus
NCBI taxonomy Id: 29172
Other names: D. viviparus, Dictyocaulus sp. AMP-2014, bovine lungworm
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