STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DICVIV_07791CoA ligase 4 family protein. (549 aa)    
Predicted Functional Partners:
DICVIV_07790
AMP-binding_C domain-containing protein.
 
     0.940
DICVIV_04883
Phosphopantetheine attachment domain protein.
   
 0.812
DICVIV_09207
Putative long-chain-fatty-acid CoA ligase 5.
  
0.809
DICVIV_10630
Uncharacterized protein.
  
 0.806
DICVIV_10629
Uncharacterized protein.
  
 0.806
DICVIV_13680
Acyl-coenzyme A oxidase; Belongs to the acyl-CoA oxidase family.
  
 0.800
DICVIV_10211
Long-chain-fatty-acid CoA ligase 5.
  
0.800
DICVIV_03250
Palmitoyl protein thioesterase.
    
 0.789
DICVIV_06245
HAD hydrolase, family IA, variant 3.
  
 
 0.763
DICVIV_09503
AMP-binding enzyme.
  
 
 0.741
Your Current Organism:
Dictyocaulus viviparus
NCBI taxonomy Id: 29172
Other names: D. viviparus, Dictyocaulus sp. AMP-2014, bovine lungworm
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