STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DICVIV_07895RhoGAP domain protein. (614 aa)    
Predicted Functional Partners:
DICVIV_08623
Uncharacterized protein.
    
 
 0.942
DICVIV_06594
Uncharacterized protein.
  
 
 0.815
DICVIV_08928
tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase.
  
  
 0.533
DICVIV_02982
Uncharacterized protein.
  
  
 0.533
DICVIV_06840
Uncharacterized protein.
   
   0.517
DICVIV_06839
Putative exosome complex exonuclease 1.
   
   0.517
DICVIV_00451
Ribosome recycling factor.
  
  
 0.485
DICVIV_04569
Ribosomal protein S11.
  
 
 0.465
DICVIV_06103
Ribosomal protein S11; Belongs to the universal ribosomal protein uS11 family.
  
 
 0.465
DICVIV_03887
MMS19_N domain-containing protein.
   
 
 0.464
Your Current Organism:
Dictyocaulus viviparus
NCBI taxonomy Id: 29172
Other names: D. viviparus, Dictyocaulus sp. AMP-2014, bovine lungworm
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.