STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DICVIV_05317ATPase, AAA family; Belongs to the AAA ATPase family. (342 aa)    
Predicted Functional Partners:
DICVIV_04771
Pex19 family protein.
    
 0.881
DICVIV_13506
Pex2_Pex12 domain-containing protein.
    
 0.862
DICVIV_02941
Peroxin 13 domain protein.
    
 0.862
DICVIV_01563
Peroxisomal membrane anchor protein region.
    
 0.860
DICVIV_07748
Uncharacterized protein.
    
 0.828
DICVIV_13561
Thioredoxin.
  
 0.821
DICVIV_06603
Nuclear protein localization protein 4 domain protein.
   
 0.814
DICVIV_12211
Glutamate-5-semialdehyde dehydrogenase.
    
 0.810
DICVIV_12210
Amino acid kinase family protein.
    
 0.810
DICVIV_00363
Aromatic-di-Alanine repeat protein.
    
 0.803
Your Current Organism:
Dictyocaulus viviparus
NCBI taxonomy Id: 29172
Other names: D. viviparus, Dictyocaulus sp. AMP-2014, bovine lungworm
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